Command line used was:

find * -type f \( -name "*.pm" -or -name "*.pl" -or -name "*.c" -or -name "*.v" -or -name "*.vhd" -or -name "*.psl" \) -print0 | parallel -q -0 sed -ri -e 's/^([[:blank:]]*[^[:blank:]]+)([[:blank:]]+)(https:\/\/embsys.technikum-wien.at\/projects\/vecs\/fiji)/\1\2\3\n\1\n\1\2The creation of this file has been supported by the publicly funded\n\1\2R\&D project Josef Ressel Center for Verification of Embedded Computing\n\1\2Systems (VECS) managed by the Christian Doppler Gesellschaft (CDG)./g'

Also, add some missing strict/warning statements and fix resulting
warnings and refine some comments in the headers of files.

The FIJI version string is stored in the root directory on file VERSION.
This is used in the following places:
 - doxygen uses it as PROJECT_NUMBER (passed as an environment
   variable set by the docs/makefile picked up by the doxyfile)
 - FIJI.pm defines and exports a FIJI_VERSION constant
 - FIJIUtils.pm inserts it for all occurrances of $FIJI_VERSION$ in the about text
 - the UG and TRM show it on their cover pages
 - FIJI/VHDL.pm, Constraints.pm, Netlist.pm put it in all generated files
   (additionally also the design ID is printed where it wasn't before)
 - all "executables" report it in the first log message

Files will be rotated once a day or if they grow to 100 MB up to 7 stages.

 - add new log files to .gitignore
 - refine documentation and install scripts
 - refine log level of "Starting/stopping execution..." to become visible
   in rotated logs
 - minor other log refinements

Otherwise, arguments to long options given with '=' are
not globbed.

Adress issue vecs/fiji#62

find * -type f \( -name "*.pm" -or -name "*.pl" -or -name "*.tst" -or -name "*.cfg" \) -print0 | parallel -q -0 sed -i -e 's/FAULT_DETECT_/FD_/g;s/RESET_/RST_/g;s/TRIGGER_/TRIG_/g;s/INSTRUMENTATION_/INST_/g;s/IMPLEMENTATION_/IMPL_/g;s/_DURATION/_DUR/g;s/_ACTIVE/_ACT/g;s/_CONFIG/_CFG/g;s/OPTIMIZATION_OFF/OPT_OFF/g;s/s_fiji_trigger_/s_fiji_trig_/g'

Due to the weird level mechanism of Log4Perl the we cannot (easily)
set the verbosity directly but only increase it. Rename functions and
variables to reflect this better and use the new function correctly.

 - introduce a new parameter to force interaction (e.g. to save files)
 - default to be interactive in manual mode because it makes no sense otherwise
 - avoid interaction in other modes unless forced

Since the appender is defined in logger.conf and thus loaded by all
applications we need to remove it at load time from all applications
but the CLI EE tool.

I.e. fix the chaos that has been growing for a while and the bugs
introduced in the patch
"fiji_ee_gui: allow to abort test runs even during long transfers"

 - make all of them a function
 - use the same parameter and return scheme for said function
 - unify indentation, wording and parameter names
 - document verbosity parameter

TODO: docs/

They are not useful in git. If need be they could be implemented by a
fudge/clean filter with git attributes.

Reapplied Beautify script

Added logging to Tk::Text widget

Added functionality to export constraints files from fiji_instrument

Removed FIJI::Settings reference from FIJI::Tests Object

Added port to Makefile so we don't have to edit test config files

Added demo file for download

Extended test description file format (see fiji_test.cfg)